Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 IER3-202ENST00000376377 1350 ntBASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 AC068418.2-201ENST00000577309 3703 ntBASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 MIR3180-1-201ENST00000580374 94 ntBASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 MIR3180-3-201ENST00000584616 94 ntBASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 AC132872.4-202ENST00000622924 2756 ntBASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF6Q9Y4K3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TRAF6Q9Y4K3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 PRYP5-201ENST00000451909 266 ntBASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 AL445228.2-201ENST00000605589 952 ntBASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 AL365203.3-201ENST00000609742 2057 ntBASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF6Q9Y4K3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 KRT18P35-201ENST00000510488 1269 ntBASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 AC012615.1-201ENST00000565797 1299 ntBASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAF6Q9Y4K3 AC099336.1-202ENST00000602961 463 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms