Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 AP002414.1-201ENST00000391405 1147 ntBASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 AL596275.1-201ENST00000423464 877 ntBASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 SIGLEC30P-201ENST00000455569 941 ntBASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 VENTXP7-201ENST00000475503 772 ntBASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 TK2-213ENST00000563369 882 ntTSL 5 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 KRT8P49-201ENST00000604166 1432 ntBASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 AC013467.2-201ENST00000605472 835 ntBASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UBE2D4Q9Y2X8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 AC006277.1-201ENST00000624348 1610 ntBASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 AC006011.2-201ENST00000621313 1158 ntBASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC11.72□□□□□ -0.53
UBE2D4Q9Y2X8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms