Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 DNAJB3-202ENST00000449667 1266 ntBASIC17.88■□□□□ 0.45
SIX4Q9UIU6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 AC026120.1-201ENST00000611536 926 ntBASIC17.88■□□□□ 0.45
SIX4Q9UIU6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX4Q9UIU6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 AC004461.1-201ENST00000412461 403 ntBASIC17.87■□□□□ 0.45
SIX4Q9UIU6 RPS8P6-201ENST00000426177 609 ntBASIC17.87■□□□□ 0.45
SIX4Q9UIU6 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 FAM86C2P-203ENST00000528684 1004 ntBASIC17.87■□□□□ 0.45
SIX4Q9UIU6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX4Q9UIU6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 PRORSD1P-202ENST00000563365 2154 ntBASIC17.86■□□□□ 0.45
SIX4Q9UIU6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 TIMM8BP1-201ENST00000452384 211 ntBASIC17.86■□□□□ 0.45
SIX4Q9UIU6 AC079140.1-201ENST00000508039 487 ntBASIC17.86■□□□□ 0.45
SIX4Q9UIU6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 AP001160.2-201ENST00000596071 487 ntBASIC17.86■□□□□ 0.45
SIX4Q9UIU6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.86■□□□□ 0.45
SIX4Q9UIU6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 GPAA1P2-202ENST00000606848 1787 ntBASIC17.86■□□□□ 0.45
SIX4Q9UIU6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SIX4Q9UIU6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SIX4Q9UIU6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SIX4Q9UIU6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SIX4Q9UIU6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.85■□□□□ 0.45
SIX4Q9UIU6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms