Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC107890.1-201ENST00000422478 521 ntBASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 AC055876.3-201ENST00000431496 288 ntBASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 AC125807.1-201ENST00000483097 614 ntBASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 ALG1L8P-201ENST00000533887 760 ntBASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 AC124947.2-201ENST00000547118 1133 ntBASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 AC138649.4-201ENST00000612222 287 ntBASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 TUBB7P-202ENST00000428444 1305 ntBASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
LRIT1Q9P2V4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 AL645608.8-201ENST00000606034 2086 ntBASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 AL138918.1-201ENST00000568306 659 ntBASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LRIT1Q9P2V4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 AC092053.1-201ENST00000605787 1936 ntBASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRIT1Q9P2V4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms