Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 AC010507.1-201ENST00000633895 436 ntBASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 AC084018.2-201ENST00000613093 2607 ntBASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.26■□□□□ 0.19
CUEDC1Q9NWM3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 FAM185BP-201ENST00000443595 716 ntBASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 MPDU1-223ENST00000582151 728 ntBASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 AL391256.1-201ENST00000443260 1855 ntBASIC16.25■□□□□ 0.19
CUEDC1Q9NWM3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 FLJ38576-201ENST00000623820 2459 ntBASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 AGGF1P2-201ENST00000426656 2106 ntBASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 RNA5SP416-201ENST00000516838 111 ntBASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 AC002347.1-201ENST00000569543 541 ntBASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CUEDC1Q9NWM3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms