Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 ALG1L5P-201ENST00000482043 771 ntBASIC19.75■□□□□ 0.75
RNF41Q9H4P4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF41Q9H4P4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 AC112482.1-201ENST00000492080 688 ntBASIC19.74■□□□□ 0.75
RNF41Q9H4P4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 AC092902.6-201ENST00000641783 218 ntBASIC19.74■□□□□ 0.75
RNF41Q9H4P4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF41Q9H4P4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 YBX1P5-201ENST00000509441 847 ntBASIC19.73■□□□□ 0.75
RNF41Q9H4P4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 AC099522.2-201ENST00000607001 744 ntBASIC19.73■□□□□ 0.75
RNF41Q9H4P4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 AL512652.2-201ENST00000625156 1716 ntBASIC19.73■□□□□ 0.75
RNF41Q9H4P4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 PRORSD1P-202ENST00000563365 2154 ntBASIC19.73■□□□□ 0.75
RNF41Q9H4P4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF41Q9H4P4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms