Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 AC027307.2-201ENST00000591252 911 ntBASIC15.03■□□□□ -0
ZNF407Q9C0G0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF407Q9C0G0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF407Q9C0G0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF407Q9C0G0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF407Q9C0G0 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.03■□□□□ -0
ZNF407Q9C0G0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF407Q9C0G0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
ZNF407Q9C0G0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.03■□□□□ -0
ZNF407Q9C0G0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF407Q9C0G0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 BCRP1-201ENST00000444246 691 ntBASIC15.02■□□□□ -0
ZNF407Q9C0G0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 AL138918.1-201ENST00000568306 659 ntBASIC15.02■□□□□ -0
ZNF407Q9C0G0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.02■□□□□ -0
ZNF407Q9C0G0 AC008267.7-201ENST00000624570 1194 ntBASIC15.02■□□□□ -0
ZNF407Q9C0G0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF407Q9C0G0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF407Q9C0G0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 AL645728.1-201ENST00000366221 2101 ntBASIC15.02■□□□□ -0
ZNF407Q9C0G0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF407Q9C0G0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 AP3S2-216ENST00000617003 1561 ntBASIC15.02■□□□□ -0
ZNF407Q9C0G0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.02■□□□□ -0
ZNF407Q9C0G0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
ZNF407Q9C0G0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ZNF407Q9C0G0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 FOXO1B-201ENST00000504678 1527 ntBASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 PCDHA12-202ENST00000613593 2588 ntBASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ZNF407Q9C0G0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms