Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.8■□□□□ 0.6
TRIM5Q9C035 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM5Q9C035 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 AL356309.3-201ENST00000624132 1934 ntBASIC18.79■□□□□ 0.6
TRIM5Q9C035 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 RNF126P1-202ENST00000569893 925 ntBASIC18.79■□□□□ 0.6
TRIM5Q9C035 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM5Q9C035 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TRIM5Q9C035 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM5Q9C035 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM5Q9C035 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRIM5Q9C035 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM5Q9C035 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM5Q9C035 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM5Q9C035 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM5Q9C035 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM5Q9C035 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM5Q9C035 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM5Q9C035 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM5Q9C035 AL138831.2-201ENST00000606564 490 ntBASIC18.78■□□□□ 0.6
TRIM5Q9C035 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM5Q9C035 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM5Q9C035 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM5Q9C035 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM5Q9C035 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM5Q9C035 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRIM5Q9C035 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
TRIM5Q9C035 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM5Q9C035 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM5Q9C035 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.78■□□□□ 0.6
TRIM5Q9C035 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM5Q9C035 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 AC068587.6-202ENST00000641839 5619 ntBASIC18.77■□□□□ 0.6
TRIM5Q9C035 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM5Q9C035 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 AC003669.1-201ENST00000334569 611 ntBASIC18.77■□□□□ 0.6
TRIM5Q9C035 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRIM5Q9C035 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM5Q9C035 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.77■□□□□ 0.6
TRIM5Q9C035 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.77■□□□□ 0.6
TRIM5Q9C035 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM5Q9C035 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 AC011558.1-201ENST00000623459 338 ntBASIC18.77■□□□□ 0.6
TRIM5Q9C035 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRIM5Q9C035 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM5Q9C035 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM5Q9C035 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM5Q9C035 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM5Q9C035 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM5Q9C035 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM5Q9C035 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
TRIM5Q9C035 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
TRIM5Q9C035 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms