Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 MYCLP1-201ENST00000372451 1075 ntBASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AC010740.1-201ENST00000417035 684 ntBASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 TK1-204ENST00000590430 683 ntTSL 3 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AC008403.3-201ENST00000598924 454 ntBASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AC124016.1-201ENST00000609552 612 ntBASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 DGCR10-201ENST00000609839 495 ntBASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 FES-204ENST00000414248 2327 ntTSL 2 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC4.55□□□□□ -1.68
LCE3DQ9BYE3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms