Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.39■□□□□ 0.21
PRPF18Q99633 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRPF18Q99633 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
PRPF18Q99633 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.39■□□□□ 0.21
PRPF18Q99633 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRPF18Q99633 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PRPF18Q99633 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PRPF18Q99633 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.38■□□□□ 0.21
PRPF18Q99633 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
PRPF18Q99633 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
PRPF18Q99633 AC132938.5-201ENST00000624980 1813 ntBASIC16.38■□□□□ 0.21
PRPF18Q99633 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PRPF18Q99633 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.38■□□□□ 0.21
PRPF18Q99633 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.38■□□□□ 0.21
PRPF18Q99633 FLJ16779-201ENST00000612722 7638 ntBASIC16.38■□□□□ 0.21
PRPF18Q99633 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PRPF18Q99633 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.38■□□□□ 0.21
PRPF18Q99633 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.38■□□□□ 0.21
PRPF18Q99633 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PRPF18Q99633 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.38■□□□□ 0.21
PRPF18Q99633 AC116407.4-201ENST00000623319 1061 ntBASIC16.38■□□□□ 0.21
PRPF18Q99633 AL590326.2-201ENST00000625139 305 ntBASIC16.38■□□□□ 0.21
PRPF18Q99633 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PRPF18Q99633 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
PRPF18Q99633 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.38■□□□□ 0.21
PRPF18Q99633 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRPF18Q99633 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PRPF18Q99633 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.37■□□□□ 0.21
PRPF18Q99633 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PRPF18Q99633 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.37■□□□□ 0.21
PRPF18Q99633 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.37■□□□□ 0.21
PRPF18Q99633 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.37■□□□□ 0.21
PRPF18Q99633 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PRPF18Q99633 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
PRPF18Q99633 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PRPF18Q99633 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.37■□□□□ 0.21
PRPF18Q99633 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 PCED1CP-201ENST00000419887 785 ntBASIC16.37■□□□□ 0.21
PRPF18Q99633 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.37■□□□□ 0.21
PRPF18Q99633 KRT17P6-201ENST00000453795 1220 ntBASIC16.37■□□□□ 0.21
PRPF18Q99633 AC091607.1-201ENST00000490318 1060 ntBASIC16.37■□□□□ 0.21
PRPF18Q99633 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PRPF18Q99633 AC087388.1-201ENST00000571370 1112 ntBASIC16.37■□□□□ 0.21
PRPF18Q99633 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.37■□□□□ 0.21
PRPF18Q99633 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.37■□□□□ 0.21
PRPF18Q99633 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.37■□□□□ 0.21
PRPF18Q99633 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.37■□□□□ 0.21
PRPF18Q99633 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.37■□□□□ 0.21
PRPF18Q99633 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.37■□□□□ 0.21
PRPF18Q99633 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PRPF18Q99633 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PRPF18Q99633 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PRPF18Q99633 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.36■□□□□ 0.21
PRPF18Q99633 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRPF18Q99633 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRPF18Q99633 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRPF18Q99633 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PRPF18Q99633 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRPF18Q99633 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRPF18Q99633 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.36■□□□□ 0.21
PRPF18Q99633 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PRPF18Q99633 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PRPF18Q99633 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PRPF18Q99633 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRPF18Q99633 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PRPF18Q99633 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PRPF18Q99633 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms