Protein–RNA interactions for Protein: Q99627

COPS8, COP9 signalosome complex subunit 8, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8Q99627 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.63■□□□□ 0.25
COPS8Q99627 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.63■□□□□ 0.25
COPS8Q99627 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS8Q99627 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS8Q99627 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS8Q99627 AC084018.2-201ENST00000613093 2607 ntBASIC16.63■□□□□ 0.25
COPS8Q99627 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS8Q99627 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS8Q99627 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
COPS8Q99627 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.63■□□□□ 0.25
COPS8Q99627 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COPS8Q99627 KRT18P2-201ENST00000447938 1258 ntBASIC16.63■□□□□ 0.25
COPS8Q99627 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS8Q99627 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COPS8Q99627 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS8Q99627 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.63■□□□□ 0.25
COPS8Q99627 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.63■□□□□ 0.25
COPS8Q99627 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.63■□□□□ 0.25
COPS8Q99627 AL031432.2-201ENST00000566714 459 ntBASIC16.63■□□□□ 0.25
COPS8Q99627 AC018845.2-201ENST00000568326 409 ntBASIC16.63■□□□□ 0.25
COPS8Q99627 AL928711.1-201ENST00000570165 459 ntBASIC16.63■□□□□ 0.25
COPS8Q99627 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.63■□□□□ 0.25
COPS8Q99627 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.63■□□□□ 0.25
COPS8Q99627 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS8Q99627 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS8Q99627 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS8Q99627 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS8Q99627 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COPS8Q99627 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.63■□□□□ 0.25
COPS8Q99627 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS8Q99627 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.63■□□□□ 0.25
COPS8Q99627 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COPS8Q99627 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COPS8Q99627 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.62■□□□□ 0.25
COPS8Q99627 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.62■□□□□ 0.25
COPS8Q99627 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 FLJ38576-201ENST00000623820 2459 ntBASIC16.62■□□□□ 0.25
COPS8Q99627 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.62■□□□□ 0.25
COPS8Q99627 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.62■□□□□ 0.25
COPS8Q99627 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 MIR940-201ENST00000401276 94 ntBASIC16.62■□□□□ 0.25
COPS8Q99627 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 KRT18P58-201ENST00000527480 1120 ntBASIC16.62■□□□□ 0.25
COPS8Q99627 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
COPS8Q99627 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.62■□□□□ 0.25
COPS8Q99627 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.62■□□□□ 0.25
COPS8Q99627 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.62■□□□□ 0.25
COPS8Q99627 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.62■□□□□ 0.25
COPS8Q99627 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 BCAR1-209ENST00000546196 1340 ntBASIC16.62■□□□□ 0.25
COPS8Q99627 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
COPS8Q99627 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
COPS8Q99627 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPS8Q99627 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
COPS8Q99627 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.61■□□□□ 0.25
COPS8Q99627 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS8Q99627 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS8Q99627 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.61■□□□□ 0.25
COPS8Q99627 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPS8Q99627 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.61■□□□□ 0.25
COPS8Q99627 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.61■□□□□ 0.25
COPS8Q99627 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS8Q99627 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.61■□□□□ 0.25
COPS8Q99627 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
COPS8Q99627 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
COPS8Q99627 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS8Q99627 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.61■□□□□ 0.25
COPS8Q99627 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPS8Q99627 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.61■□□□□ 0.25
COPS8Q99627 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms