Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.77□□□□□ -0.37
AP1S3Q96PC3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 AC105917.1-201ENST00000506637 2539 ntBASIC12.76□□□□□ -0.37
AP1S3Q96PC3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 TSPY14P-201ENST00000303979 915 ntBASIC12.76□□□□□ -0.37
AP1S3Q96PC3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 AC005104.2-201ENST00000427818 678 ntBASIC12.76□□□□□ -0.37
AP1S3Q96PC3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 EGLN1P1-201ENST00000531623 762 ntBASIC12.76□□□□□ -0.37
AP1S3Q96PC3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 KRT89P-201ENST00000620027 1478 ntBASIC12.76□□□□□ -0.37
AP1S3Q96PC3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 AC022188.1-201ENST00000620960 1664 ntBASIC12.76□□□□□ -0.37
AP1S3Q96PC3 AC116353.5-201ENST00000638148 1699 ntBASIC12.76□□□□□ -0.37
AP1S3Q96PC3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP1S3Q96PC3 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 MIR1238-201ENST00000408483 83 ntBASIC12.75□□□□□ -0.37
AP1S3Q96PC3 AL390955.1-201ENST00000428694 934 ntBASIC12.75□□□□□ -0.37
AP1S3Q96PC3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 AC034232.1-201ENST00000506026 1064 ntBASIC12.75□□□□□ -0.37
AP1S3Q96PC3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms