Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 NKAPP1-205ENST00000585790 367 ntBASIC12.19□□□□□ -0.46
C9orf85Q96MD7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 AL358472.4-201ENST00000633140 710 ntBASIC12.19□□□□□ -0.46
C9orf85Q96MD7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 AC007950.2-201ENST00000615045 2347 ntBASIC12.19□□□□□ -0.46
C9orf85Q96MD7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
C9orf85Q96MD7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 AC002310.6-201ENST00000624451 1377 ntBASIC12.18□□□□□ -0.46
C9orf85Q96MD7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 AC005052.1-201ENST00000625181 2492 ntBASIC12.18□□□□□ -0.46
C9orf85Q96MD7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 MIR4492-201ENST00000581627 80 ntBASIC12.18□□□□□ -0.46
C9orf85Q96MD7 MPDU1-223ENST00000582151 728 ntBASIC12.18□□□□□ -0.46
C9orf85Q96MD7 AC091076.1-201ENST00000610741 619 ntBASIC12.18□□□□□ -0.46
C9orf85Q96MD7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 AL162727.3-201ENST00000635661 2787 ntBASIC12.18□□□□□ -0.46
C9orf85Q96MD7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
C9orf85Q96MD7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AL365203.3-201ENST00000609742 2057 ntBASIC12.17□□□□□ -0.46
C9orf85Q96MD7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AC091167.2-201ENST00000579581 588 ntBASIC12.17□□□□□ -0.46
C9orf85Q96MD7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms