Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ALPK3Q96L96 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ALPK3Q96L96 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ALPK3Q96L96 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 ACTG1P17-201ENST00000558391 1119 ntBASIC17.96■□□□□ 0.47
ALPK3Q96L96 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 AC025048.3-201ENST00000590609 569 ntBASIC17.96■□□□□ 0.47
ALPK3Q96L96 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 LINC01115-203ENST00000606068 577 ntBASIC17.96■□□□□ 0.47
ALPK3Q96L96 AC005702.4-201ENST00000618393 416 ntBASIC17.96■□□□□ 0.47
ALPK3Q96L96 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ALPK3Q96L96 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ALPK3Q96L96 AC106872.11-201ENST00000605838 421 ntBASIC17.96■□□□□ 0.47
ALPK3Q96L96 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.96■□□□□ 0.47
ALPK3Q96L96 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ALPK3Q96L96 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALPK3Q96L96 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALPK3Q96L96 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.95■□□□□ 0.46
ALPK3Q96L96 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ALPK3Q96L96 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.95■□□□□ 0.46
ALPK3Q96L96 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
ALPK3Q96L96 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.95■□□□□ 0.46
ALPK3Q96L96 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.95■□□□□ 0.46
ALPK3Q96L96 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.95■□□□□ 0.46
ALPK3Q96L96 SPDYE17-201ENST00000412399 783 ntBASIC17.95■□□□□ 0.46
ALPK3Q96L96 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.95■□□□□ 0.46
ALPK3Q96L96 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ALPK3Q96L96 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ALPK3Q96L96 MPDU1-223ENST00000582151 728 ntBASIC17.95■□□□□ 0.46
ALPK3Q96L96 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.95■□□□□ 0.46
ALPK3Q96L96 AL118558.3-201ENST00000607414 1079 ntBASIC17.95■□□□□ 0.46
ALPK3Q96L96 AC074044.1-201ENST00000609673 707 ntBASIC17.95■□□□□ 0.46
ALPK3Q96L96 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALPK3Q96L96 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALPK3Q96L96 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ALPK3Q96L96 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ALPK3Q96L96 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ALPK3Q96L96 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALPK3Q96L96 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ALPK3Q96L96 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALPK3Q96L96 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALPK3Q96L96 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALPK3Q96L96 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 AC093724.1-201ENST00000448659 1027 ntBASIC17.94■□□□□ 0.46
ALPK3Q96L96 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 AL158212.4-201ENST00000624062 1286 ntBASIC17.94■□□□□ 0.46
ALPK3Q96L96 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
ALPK3Q96L96 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ALPK3Q96L96 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ALPK3Q96L96 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALPK3Q96L96 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ALPK3Q96L96 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms