Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CALR3Q96L12 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CALR3Q96L12 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.79■□□□□ 0.44
CALR3Q96L12 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.79■□□□□ 0.44
CALR3Q96L12 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.79■□□□□ 0.44
CALR3Q96L12 ATP5G2P1-201ENST00000433580 426 ntBASIC17.79■□□□□ 0.44
CALR3Q96L12 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 PAWRP1-201ENST00000451083 565 ntBASIC17.79■□□□□ 0.44
CALR3Q96L12 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.79■□□□□ 0.44
CALR3Q96L12 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.79■□□□□ 0.44
CALR3Q96L12 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CALR3Q96L12 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.79■□□□□ 0.44
CALR3Q96L12 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.79■□□□□ 0.44
CALR3Q96L12 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CALR3Q96L12 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.79■□□□□ 0.44
CALR3Q96L12 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 AC069148.1-201ENST00000608741 768 ntBASIC17.79■□□□□ 0.44
CALR3Q96L12 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.79■□□□□ 0.44
CALR3Q96L12 NPAP1P7-201ENST00000613027 823 ntBASIC17.79■□□□□ 0.44
CALR3Q96L12 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.79■□□□□ 0.44
CALR3Q96L12 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CALR3Q96L12 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CALR3Q96L12 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CALR3Q96L12 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CALR3Q96L12 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.79■□□□□ 0.44
CALR3Q96L12 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.79■□□□□ 0.44
CALR3Q96L12 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CALR3Q96L12 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.78■□□□□ 0.44
CALR3Q96L12 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CALR3Q96L12 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 AC091167.2-201ENST00000579581 588 ntBASIC17.78■□□□□ 0.44
CALR3Q96L12 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.78■□□□□ 0.44
CALR3Q96L12 AL139424.1-201ENST00000607572 797 ntBASIC17.78■□□□□ 0.44
CALR3Q96L12 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.78■□□□□ 0.44
CALR3Q96L12 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.78■□□□□ 0.44
CALR3Q96L12 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.78■□□□□ 0.44
CALR3Q96L12 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CALR3Q96L12 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CALR3Q96L12 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.78■□□□□ 0.44
CALR3Q96L12 KRT8P39-201ENST00000396270 1433 ntBASIC17.78■□□□□ 0.44
CALR3Q96L12 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.78■□□□□ 0.44
CALR3Q96L12 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.78■□□□□ 0.44
CALR3Q96L12 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.78■□□□□ 0.44
CALR3Q96L12 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CALR3Q96L12 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.78■□□□□ 0.44
CALR3Q96L12 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CALR3Q96L12 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.78■□□□□ 0.44
CALR3Q96L12 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.77■□□□□ 0.44
CALR3Q96L12 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CALR3Q96L12 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.77■□□□□ 0.44
CALR3Q96L12 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.77■□□□□ 0.44
CALR3Q96L12 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.77■□□□□ 0.44
CALR3Q96L12 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CALR3Q96L12 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.77■□□□□ 0.44
CALR3Q96L12 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.77■□□□□ 0.44
CALR3Q96L12 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CALR3Q96L12 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.77■□□□□ 0.44
CALR3Q96L12 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.77■□□□□ 0.44
CALR3Q96L12 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.77■□□□□ 0.44
CALR3Q96L12 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.77■□□□□ 0.44
CALR3Q96L12 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.77■□□□□ 0.44
CALR3Q96L12 AC087388.1-201ENST00000571370 1112 ntBASIC17.77■□□□□ 0.44
CALR3Q96L12 MIR4492-201ENST00000581627 80 ntBASIC17.77■□□□□ 0.44
CALR3Q96L12 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CALR3Q96L12 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms