Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE2Q96FN4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE2Q96FN4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CPNE2Q96FN4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPNE2Q96FN4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 AC078925.2-201ENST00000624013 1973 ntBASIC14.67□□□□□ -0.06
CPNE2Q96FN4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 POM121L3P-201ENST00000419331 1163 ntBASIC14.67□□□□□ -0.06
CPNE2Q96FN4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 AC114341.1-201ENST00000618070 349 ntBASIC14.67□□□□□ -0.06
CPNE2Q96FN4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CPNE2Q96FN4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 AC005332.1-201ENST00000577698 1310 ntBASIC14.66□□□□□ -0.06
CPNE2Q96FN4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 INTS4P1-201ENST00000438455 1935 ntBASIC14.66□□□□□ -0.06
CPNE2Q96FN4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 PMPCAP1-201ENST00000508114 1576 ntBASIC14.66□□□□□ -0.06
CPNE2Q96FN4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 RCN1P1-201ENST00000400413 996 ntBASIC14.66□□□□□ -0.06
CPNE2Q96FN4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 KRT17P6-201ENST00000453795 1220 ntBASIC14.66□□□□□ -0.06
CPNE2Q96FN4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CPNE2Q96FN4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CPNE2Q96FN4 AL031133.1-201ENST00000406807 723 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms