Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 AC104989.1-201ENST00000519711 778 ntBASIC19.39■□□□□ 0.69
CDCA5Q96FF9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDCA5Q96FF9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 GPR182-203ENST00000622922 591 ntBASIC19.38■□□□□ 0.69
CDCA5Q96FF9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDCA5Q96FF9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 BOLA2P3-201ENST00000404566 256 ntBASIC19.37■□□□□ 0.69
CDCA5Q96FF9 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 ACTBP11-201ENST00000436287 1126 ntBASIC19.37■□□□□ 0.69
CDCA5Q96FF9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 TMEM261P1-201ENST00000604899 340 ntBASIC19.37■□□□□ 0.69
CDCA5Q96FF9 AL033527.5-201ENST00000641382 801 ntBASIC19.37■□□□□ 0.69
CDCA5Q96FF9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 NOC2LP1-202ENST00000452600 2235 ntBASIC19.37■□□□□ 0.69
CDCA5Q96FF9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 BICD1-207ENST00000551848 1962 ntBASIC19.37■□□□□ 0.69
CDCA5Q96FF9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.37■□□□□ 0.69
CDCA5Q96FF9 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 AC024267.1-201ENST00000582320 895 ntBASIC19.36■□□□□ 0.69
CDCA5Q96FF9 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 AC015936.2-201ENST00000593177 259 ntBASIC19.36■□□□□ 0.69
CDCA5Q96FF9 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.36■□□□□ 0.69
CDCA5Q96FF9 MIR6787-201ENST00000616675 61 ntBASIC19.36■□□□□ 0.69
CDCA5Q96FF9 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms