Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 NFIC-211ENST00000641145 8399 ntBASIC15.89■□□□□ 0.13
TM9SF4Q92544 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 AL645939.2-201ENST00000427340 991 ntBASIC15.89■□□□□ 0.13
TM9SF4Q92544 RHOQP3-201ENST00000437982 621 ntBASIC15.89■□□□□ 0.13
TM9SF4Q92544 CYMP-203ENST00000474680 1263 ntBASIC15.89■□□□□ 0.13
TM9SF4Q92544 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 AP000344.2-201ENST00000512987 629 ntBASIC15.89■□□□□ 0.13
TM9SF4Q92544 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 RFPL4AP1-201ENST00000530883 850 ntBASIC15.89■□□□□ 0.13
TM9SF4Q92544 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TM9SF4Q92544 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.89■□□□□ 0.13
TM9SF4Q92544 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 FAM58CP-201ENST00000435741 640 ntBASIC15.88■□□□□ 0.13
TM9SF4Q92544 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 CXCL1P1-201ENST00000502804 216 ntBASIC15.88■□□□□ 0.13
TM9SF4Q92544 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 AC060834.1-201ENST00000443027 2032 ntBASIC15.88■□□□□ 0.13
TM9SF4Q92544 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TM9SF4Q92544 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.88■□□□□ 0.13
TM9SF4Q92544 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms