Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 TSPY12P-201ENST00000421279 868 ntBASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 AC096633.1-201ENST00000422446 749 ntBASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 NUDT16P1-203ENST00000513809 620 ntBASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 RNA5SP413-201ENST00000516373 109 ntBASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 AC024563.2-201ENST00000603282 481 ntBASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 AL109923.1-201ENST00000618799 583 ntBASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SMIM11BQ8TCY0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 PRAL-201ENST00000624952 3286 ntBASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 KRT89P-201ENST00000620027 1478 ntBASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 COX5BP2-201ENST00000392354 334 ntBASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 SAPCD2P4-201ENST00000424595 1171 ntBASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 AC109462.3-201ENST00000573934 613 ntBASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC10.94□□□□□ -0.66
SMIM11BQ8TCY0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 AC023157.3-201ENST00000619086 2088 ntBASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 PPT1-215ENST00000641471 2368 ntBASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SMIM11BQ8TCY0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms