Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 IRS3P-201ENST00000223076 1006 ntBASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 AL390719.1-204ENST00000412397 1219 ntBASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 AC099791.1-201ENST00000416440 715 ntBASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 AC019069.1-201ENST00000610008 1333 ntBASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
SPTSSBQ8NFR3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 KRT18P55-202ENST00000578578 1546 ntBASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
SPTSSBQ8NFR3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 TESC-206ENST00000541210 936 ntTSL 3 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SPTSSBQ8NFR3 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms