Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 AC131009.4-201ENST00000624048 1740 ntBASIC15.73■□□□□ 0.11
NUP43Q8NFH3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NUP43Q8NFH3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 AC129492.6-201ENST00000611383 1305 ntBASIC15.72■□□□□ 0.11
NUP43Q8NFH3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 AC107918.2-201ENST00000530817 355 ntBASIC15.72■□□□□ 0.11
NUP43Q8NFH3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 AL160237.2-201ENST00000556165 472 ntBASIC15.72■□□□□ 0.11
NUP43Q8NFH3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 MIR4492-201ENST00000581627 80 ntBASIC15.72■□□□□ 0.11
NUP43Q8NFH3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NUP43Q8NFH3 AL353732.1-201ENST00000569618 1459 ntBASIC15.71■□□□□ 0.11
NUP43Q8NFH3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 MRPL20P1-201ENST00000400819 433 ntBASIC15.71■□□□□ 0.11
NUP43Q8NFH3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 AL031284.1-201ENST00000419297 478 ntBASIC15.71■□□□□ 0.11
NUP43Q8NFH3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 PMS2P1-201ENST00000431037 1228 ntBASIC15.71■□□□□ 0.11
NUP43Q8NFH3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 AC092910.1-201ENST00000482027 1129 ntBASIC15.71■□□□□ 0.11
NUP43Q8NFH3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUP43Q8NFH3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
NUP43Q8NFH3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.71■□□□□ 0.1
NUP43Q8NFH3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NUP43Q8NFH3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NUP43Q8NFH3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NUP43Q8NFH3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NUP43Q8NFH3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms