Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 AL031731.1-201ENST00000642131 2094 ntBASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC4A11Q8NBS3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 YBX2P1-201ENST00000394192 760 ntBASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 PMS2P4-201ENST00000412466 1052 ntBASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 AC109635.5-201ENST00000533593 962 ntBASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 GGT4P-201ENST00000623672 1708 ntBASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC4A11Q8NBS3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 AC092474.2-201ENST00000424288 719 ntBASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC4A11Q8NBS3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC4A11Q8NBS3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms