Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KDM1BQ8NB78 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 PMS2P4-201ENST00000412466 1052 ntBASIC17.11■□□□□ 0.33
KDM1BQ8NB78 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 AC022145.2-201ENST00000598203 171 ntBASIC17.11■□□□□ 0.33
KDM1BQ8NB78 AL009183.1-201ENST00000603760 355 ntBASIC17.11■□□□□ 0.33
KDM1BQ8NB78 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.11■□□□□ 0.33
KDM1BQ8NB78 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 AC005915.1-201ENST00000624912 2018 ntBASIC17.1■□□□□ 0.33
KDM1BQ8NB78 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 AC004461.1-201ENST00000412461 403 ntBASIC17.1■□□□□ 0.33
KDM1BQ8NB78 AC092474.2-201ENST00000424288 719 ntBASIC17.1■□□□□ 0.33
KDM1BQ8NB78 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.1■□□□□ 0.33
KDM1BQ8NB78 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 AC018695.7-201ENST00000624587 2492 ntBASIC17.1■□□□□ 0.33
KDM1BQ8NB78 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 SLC22A20-204ENST00000530038 1673 ntBASIC17.1■□□□□ 0.33
KDM1BQ8NB78 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
KDM1BQ8NB78 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM1BQ8NB78 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM1BQ8NB78 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
KDM1BQ8NB78 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM1BQ8NB78 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM1BQ8NB78 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
KDM1BQ8NB78 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM1BQ8NB78 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
KDM1BQ8NB78 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM1BQ8NB78 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM1BQ8NB78 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
KDM1BQ8NB78 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms