Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCML4Q8N228 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCML4Q8N228 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCML4Q8N228 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.38■□□□□ 0.37
SCML4Q8N228 SPDYE11-202ENST00000450699 704 ntBASIC17.38■□□□□ 0.37
SCML4Q8N228 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.38■□□□□ 0.37
SCML4Q8N228 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.38■□□□□ 0.37
SCML4Q8N228 KRT8P48-201ENST00000515599 1220 ntBASIC17.38■□□□□ 0.37
SCML4Q8N228 KRT8P23-201ENST00000560090 1207 ntBASIC17.38■□□□□ 0.37
SCML4Q8N228 SPDYE9P-201ENST00000570642 692 ntBASIC17.38■□□□□ 0.37
SCML4Q8N228 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.38■□□□□ 0.37
SCML4Q8N228 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.38■□□□□ 0.37
SCML4Q8N228 AC022145.2-201ENST00000598203 171 ntBASIC17.38■□□□□ 0.37
SCML4Q8N228 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.38■□□□□ 0.37
SCML4Q8N228 SPDYE10P-202ENST00000612005 668 ntBASIC17.38■□□□□ 0.37
SCML4Q8N228 SPDYE8P-202ENST00000612377 668 ntBASIC17.38■□□□□ 0.37
SCML4Q8N228 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.38■□□□□ 0.37
SCML4Q8N228 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 GGT3P-204ENST00000453783 1664 ntBASIC17.38■□□□□ 0.37
SCML4Q8N228 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.38■□□□□ 0.37
SCML4Q8N228 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.38■□□□□ 0.37
SCML4Q8N228 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SCML4Q8N228 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.38■□□□□ 0.37
SCML4Q8N228 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCML4Q8N228 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCML4Q8N228 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SCML4Q8N228 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SCML4Q8N228 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SCML4Q8N228 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.37■□□□□ 0.37
SCML4Q8N228 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SCML4Q8N228 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.37■□□□□ 0.37
SCML4Q8N228 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.37■□□□□ 0.37
SCML4Q8N228 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.37■□□□□ 0.37
SCML4Q8N228 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.37■□□□□ 0.37
SCML4Q8N228 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.37■□□□□ 0.37
SCML4Q8N228 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 LINC01225-203ENST00000563550 1244 ntBASIC17.37■□□□□ 0.37
SCML4Q8N228 AC073389.1-201ENST00000595595 795 ntBASIC17.37■□□□□ 0.37
SCML4Q8N228 GPALPP1-207ENST00000611650 899 ntBASIC17.37■□□□□ 0.37
SCML4Q8N228 AC008267.7-201ENST00000624570 1194 ntBASIC17.37■□□□□ 0.37
SCML4Q8N228 AC079781.4-201ENST00000641908 219 ntBASIC17.37■□□□□ 0.37
SCML4Q8N228 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SCML4Q8N228 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.37■□□□□ 0.37
SCML4Q8N228 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SCML4Q8N228 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.37■□□□□ 0.37
SCML4Q8N228 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SCML4Q8N228 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SCML4Q8N228 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SCML4Q8N228 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SCML4Q8N228 HCG11-201ENST00000411553 5696 ntBASIC17.37■□□□□ 0.37
SCML4Q8N228 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCML4Q8N228 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 AGGF1P2-201ENST00000426656 2106 ntBASIC17.36■□□□□ 0.37
SCML4Q8N228 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.36■□□□□ 0.37
SCML4Q8N228 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.36■□□□□ 0.37
SCML4Q8N228 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.36■□□□□ 0.37
SCML4Q8N228 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.36■□□□□ 0.37
SCML4Q8N228 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.36■□□□□ 0.37
SCML4Q8N228 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.36■□□□□ 0.37
SCML4Q8N228 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.36■□□□□ 0.37
SCML4Q8N228 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SCML4Q8N228 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.36■□□□□ 0.37
SCML4Q8N228 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 AC079140.1-201ENST00000508039 487 ntBASIC17.36■□□□□ 0.37
SCML4Q8N228 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.36■□□□□ 0.37
SCML4Q8N228 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.36■□□□□ 0.37
SCML4Q8N228 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.36■□□□□ 0.37
SCML4Q8N228 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.36■□□□□ 0.37
SCML4Q8N228 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.36■□□□□ 0.37
SCML4Q8N228 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.36■□□□□ 0.37
SCML4Q8N228 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.36■□□□□ 0.37
SCML4Q8N228 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML4Q8N228 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCML4Q8N228 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms