Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 HLA-A-202ENST00000376806 1854 ntBASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC116Q8IYX3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 RNA5SP419-201ENST00000515908 135 ntBASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 AL662844.1-201ENST00000546340 181 ntBASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 MPDU1-223ENST00000582151 728 ntBASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC116Q8IYX3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 MRPL20P1-201ENST00000400819 433 ntBASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 AC108073.2-201ENST00000464002 357 ntBASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 RN7SL602P-201ENST00000578326 324 ntBASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 AC013467.2-201ENST00000605472 835 ntBASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 AC129492.6-201ENST00000611383 1305 ntBASIC15.84■□□□□ 0.13
CCDC116Q8IYX3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms