Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 AC113410.3-201ENST00000623366 203 ntBASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 LINC00528-201ENST00000600723 2160 ntBASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 AC007191.1-201ENST00000623179 2995 ntBASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD2Q8IV50 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 PKD1P5-201ENST00000532415 10291 ntBASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD2Q8IV50 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 HLA-J-202ENST00000469281 1241 ntBASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 AC116562.4-202ENST00000641738 218 ntBASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
LYSMD2Q8IV50 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 GGT4P-201ENST00000623672 1708 ntBASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 ID1-201ENST00000376105 1233 ntBASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 AC002558.1-201ENST00000488906 803 ntBASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 AL109954.1-202ENST00000564051 2148 ntBASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD2Q8IV50 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms