Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 KRT8P39-201ENST00000396270 1433 ntBASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 BANF1P1-201ENST00000553684 263 ntBASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 AL671710.1-201ENST00000610245 2349 ntBASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.85■□□□□ 0.45
NPAS4Q8IUM7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 AC092053.1-201ENST00000605787 1936 ntBASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS4Q8IUM7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS4Q8IUM7 OR8S1-201ENST00000310194 1080 ntBASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 TP53TG3HP-202ENST00000569755 579 ntBASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 AL133215.2-201ENST00000609242 977 ntBASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS4Q8IUM7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 CU639417.3-201ENST00000624240 1404 ntBASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.82■□□□□ 0.44
NPAS4Q8IUM7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms