Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 KRT18P32-201ENST00000424695 1287 ntBASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 AL138918.1-201ENST00000568306 659 ntBASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SWSAP1Q6NVH7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 RFPL4AP1-201ENST00000530883 850 ntBASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 KRT8P23-201ENST00000560090 1207 ntBASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 AC027307.2-201ENST00000591252 911 ntBASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 AC005915.1-201ENST00000624912 2018 ntBASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SWSAP1Q6NVH7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 AP002490.2-201ENST00000524791 560 ntBASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 AL355385.1-201ENST00000606123 409 ntBASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 AC106028.4-201ENST00000614509 607 ntBASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 AC008267.7-201ENST00000624570 1194 ntBASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SWSAP1Q6NVH7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SWSAP1Q6NVH7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms