Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 KRT18P31-201ENST00000506277 1292 ntBASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 PCGF3-213ENST00000620529 1899 ntBASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 AC010491.1-201ENST00000563101 2797 ntBASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDKAL1Q5VV42 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 AC010654.1-201ENST00000615722 808 ntBASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKAL1Q5VV42 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CDKAL1Q5VV42 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.33■□□□□ 0.53
CDKAL1Q5VV42 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDKAL1Q5VV42 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.33■□□□□ 0.53
CDKAL1Q5VV42 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKAL1Q5VV42 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKAL1Q5VV42 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CDKAL1Q5VV42 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKAL1Q5VV42 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKAL1Q5VV42 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CDKAL1Q5VV42 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKAL1Q5VV42 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 POU5F1P6-201ENST00000466990 990 ntBASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 AL445228.2-201ENST00000605589 952 ntBASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 AC008608.2-201ENST00000606089 416 ntBASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 REXO1L6P-202ENST00000619970 1078 ntBASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 REXO1L8P-201ENST00000604378 1897 ntBASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 AL353732.1-201ENST00000569618 1459 ntBASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKAL1Q5VV42 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms