Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 AC004461.1-201ENST00000412461 403 ntBASIC20.42■□□□□ 0.86
TNNI3KQ59H18 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.42■□□□□ 0.86
TNNI3KQ59H18 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 GGT4P-201ENST00000623672 1708 ntBASIC20.41■□□□□ 0.86
TNNI3KQ59H18 UBALD1-205ENST00000590891 2641 ntBASIC20.41■□□□□ 0.86
TNNI3KQ59H18 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 SPDYE11-202ENST00000450699 704 ntBASIC20.41■□□□□ 0.86
TNNI3KQ59H18 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 AC079140.1-201ENST00000508039 487 ntBASIC20.41■□□□□ 0.86
TNNI3KQ59H18 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 AP000344.2-201ENST00000512987 629 ntBASIC20.41■□□□□ 0.86
TNNI3KQ59H18 SPDYE9P-201ENST00000570642 692 ntBASIC20.41■□□□□ 0.86
TNNI3KQ59H18 SPDYE10P-202ENST00000612005 668 ntBASIC20.41■□□□□ 0.86
TNNI3KQ59H18 SPDYE8P-202ENST00000612377 668 ntBASIC20.41■□□□□ 0.86
TNNI3KQ59H18 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 AC011676.5-201ENST00000624864 2660 ntBASIC20.41■□□□□ 0.86
TNNI3KQ59H18 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TNNI3KQ59H18 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 CNN2P11-201ENST00000429351 262 ntBASIC20.4■□□□□ 0.86
TNNI3KQ59H18 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 RN7SL589P-201ENST00000481268 310 ntBASIC20.4■□□□□ 0.86
TNNI3KQ59H18 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNNI3KQ59H18 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI3KQ59H18 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI3KQ59H18 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.39■□□□□ 0.86
TNNI3KQ59H18 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI3KQ59H18 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TNNI3KQ59H18 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
TNNI3KQ59H18 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNNI3KQ59H18 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 SPCS2P4-201ENST00000436160 681 ntBASIC20.39■□□□□ 0.85
TNNI3KQ59H18 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 AC079781.4-201ENST00000641908 219 ntBASIC20.39■□□□□ 0.85
TNNI3KQ59H18 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TNNI3KQ59H18 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 AC092171.3-201ENST00000610122 2651 ntBASIC20.38■□□□□ 0.85
TNNI3KQ59H18 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNNI3KQ59H18 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms