Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 AC009118.2-201ENST00000613275 655 ntBASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 MIR6080-201ENST00000617359 66 ntBASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 AC046185.3-201ENST00000623228 1824 ntBASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTC1Q2NKJ3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 AC109635.5-201ENST00000533593 962 ntBASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTC1Q2NKJ3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 MIR346-201ENST00000362234 95 ntBASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTC1Q2NKJ3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTC1Q2NKJ3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTC1Q2NKJ3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
CTC1Q2NKJ3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 TSSK5P-201ENST00000423978 907 ntBASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.89■□□□□ 0.45
CTC1Q2NKJ3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms