Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SCN7AQ01118 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN7AQ01118 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN7AQ01118 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN7AQ01118 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.58■□□□□ 0.88
SCN7AQ01118 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCN7AQ01118 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN7AQ01118 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCN7AQ01118 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN7AQ01118 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCN7AQ01118 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.58■□□□□ 0.88
SCN7AQ01118 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.58■□□□□ 0.88
SCN7AQ01118 AP002490.2-201ENST00000524791 560 ntBASIC20.58■□□□□ 0.88
SCN7AQ01118 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN7AQ01118 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
SCN7AQ01118 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN7AQ01118 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.58■□□□□ 0.88
SCN7AQ01118 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.58■□□□□ 0.88
SCN7AQ01118 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SCN7AQ01118 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.88
SCN7AQ01118 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.58■□□□□ 0.88
SCN7AQ01118 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.58■□□□□ 0.88
SCN7AQ01118 RPSAP52-203ENST00000622976 1023 ntBASIC20.58■□□□□ 0.88
SCN7AQ01118 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN7AQ01118 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SCN7AQ01118 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN7AQ01118 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN7AQ01118 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN7AQ01118 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN7AQ01118 AL512652.2-201ENST00000625156 1716 ntBASIC20.57■□□□□ 0.88
SCN7AQ01118 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN7AQ01118 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN7AQ01118 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN7AQ01118 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SCN7AQ01118 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN7AQ01118 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN7AQ01118 AC087499.6-201ENST00000411576 835 ntBASIC20.57■□□□□ 0.88
SCN7AQ01118 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN7AQ01118 USP32P1-208ENST00000506594 1164 ntBASIC20.57■□□□□ 0.88
SCN7AQ01118 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN7AQ01118 AC020765.3-201ENST00000613051 740 ntBASIC20.57■□□□□ 0.88
SCN7AQ01118 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN7AQ01118 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN7AQ01118 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN7AQ01118 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN7AQ01118 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN7AQ01118 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SCN7AQ01118 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SCN7AQ01118 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SCN7AQ01118 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCN7AQ01118 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN7AQ01118 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCN7AQ01118 AC026979.3-201ENST00000607315 403 ntBASIC20.56■□□□□ 0.88
SCN7AQ01118 AL162274.1-201ENST00000617191 1098 ntBASIC20.56■□□□□ 0.88
SCN7AQ01118 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.56■□□□□ 0.88
SCN7AQ01118 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN7AQ01118 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.56■□□□□ 0.88
SCN7AQ01118 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN7AQ01118 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN7AQ01118 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN7AQ01118 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SCN7AQ01118 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN7AQ01118 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN7AQ01118 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN7AQ01118 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN7AQ01118 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SCN7AQ01118 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN7AQ01118 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN7AQ01118 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN7AQ01118 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.55■□□□□ 0.88
SCN7AQ01118 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.55■□□□□ 0.88
SCN7AQ01118 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.55■□□□□ 0.88
SCN7AQ01118 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCN7AQ01118 EEF1DP4-201ENST00000446006 880 ntBASIC20.55■□□□□ 0.88
SCN7AQ01118 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.55■□□□□ 0.88
SCN7AQ01118 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN7AQ01118 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.55■□□□□ 0.88
SCN7AQ01118 AC123567.1-201ENST00000548294 1261 ntBASIC20.55■□□□□ 0.88
SCN7AQ01118 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.55■□□□□ 0.88
SCN7AQ01118 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SCN7AQ01118 AC074044.1-201ENST00000609673 707 ntBASIC20.55■□□□□ 0.88
SCN7AQ01118 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.55■□□□□ 0.88
SCN7AQ01118 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SCN7AQ01118 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SCN7AQ01118 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SCN7AQ01118 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCN7AQ01118 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCN7AQ01118 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCN7AQ01118 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.55■□□□□ 0.88
SCN7AQ01118 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.55■□□□□ 0.88
SCN7AQ01118 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SCN7AQ01118 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.55■□□□□ 0.88
SCN7AQ01118 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN7AQ01118 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SCN7AQ01118 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.54■□□□□ 0.88
SCN7AQ01118 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.54■□□□□ 0.88
SCN7AQ01118 RRP7BP-205ENST00000566851 833 ntBASIC20.54■□□□□ 0.88
SCN7AQ01118 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms