Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
AP1S2P56377 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.36■□□□□ 0.21
AP1S2P56377 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 CYP2A7P1-201ENST00000595391 815 ntBASIC16.36■□□□□ 0.21
AP1S2P56377 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
AP1S2P56377 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
AP1S2P56377 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
AP1S2P56377 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.36■□□□□ 0.21
AP1S2P56377 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP1S2P56377 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.36■□□□□ 0.21
AP1S2P56377 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.36■□□□□ 0.21
AP1S2P56377 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 AC099398.1-201ENST00000567919 2776 ntBASIC16.36■□□□□ 0.21
AP1S2P56377 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP1S2P56377 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.36■□□□□ 0.21
AP1S2P56377 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.36■□□□□ 0.21
AP1S2P56377 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.36■□□□□ 0.21
AP1S2P56377 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP1S2P56377 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S2P56377 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AP1S2P56377 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S2P56377 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.35■□□□□ 0.21
AP1S2P56377 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.35■□□□□ 0.21
AP1S2P56377 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.35■□□□□ 0.21
AP1S2P56377 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.35■□□□□ 0.21
AP1S2P56377 FAM185BP-201ENST00000443595 716 ntBASIC16.35■□□□□ 0.21
AP1S2P56377 AC009078.2-202ENST00000463353 338 ntBASIC16.35■□□□□ 0.21
AP1S2P56377 IGHV3-22-201ENST00000520721 359 ntBASIC16.35■□□□□ 0.21
AP1S2P56377 UNC93B6-202ENST00000528242 690 ntBASIC16.35■□□□□ 0.21
AP1S2P56377 MIR4751-201ENST00000578027 74 ntBASIC16.35■□□□□ 0.21
AP1S2P56377 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
AP1S2P56377 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S2P56377 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.35■□□□□ 0.21
AP1S2P56377 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S2P56377 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S2P56377 HLA-A-201ENST00000376802 1334 ntBASIC16.35■□□□□ 0.21
AP1S2P56377 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S2P56377 SNX33P1-201ENST00000592116 1762 ntBASIC16.35■□□□□ 0.21
AP1S2P56377 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S2P56377 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S2P56377 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.35■□□□□ 0.21
AP1S2P56377 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP1S2P56377 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.35■□□□□ 0.21
AP1S2P56377 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.34■□□□□ 0.21
AP1S2P56377 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP1S2P56377 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
AP1S2P56377 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP1S2P56377 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.34■□□□□ 0.21
AP1S2P56377 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.34■□□□□ 0.21
AP1S2P56377 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.34■□□□□ 0.21
AP1S2P56377 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.34■□□□□ 0.21
AP1S2P56377 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.34■□□□□ 0.21
AP1S2P56377 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
AP1S2P56377 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.34■□□□□ 0.21
AP1S2P56377 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.34■□□□□ 0.21
AP1S2P56377 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.34■□□□□ 0.21
AP1S2P56377 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.34■□□□□ 0.21
AP1S2P56377 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 AC092171.3-201ENST00000610122 2651 ntBASIC16.34■□□□□ 0.21
AP1S2P56377 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.34■□□□□ 0.21
AP1S2P56377 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP1S2P56377 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.34■□□□□ 0.21
AP1S2P56377 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.34■□□□□ 0.21
AP1S2P56377 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
AP1S2P56377 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP1S2P56377 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
AP1S2P56377 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP1S2P56377 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP1S2P56377 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
AP1S2P56377 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
AP1S2P56377 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
AP1S2P56377 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.33■□□□□ 0.21
AP1S2P56377 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP1S2P56377 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms