Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.51□□□□□ -0.25
PAX9P55771 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PAX9P55771 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PAX9P55771 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 SNX33P1-201ENST00000592116 1762 ntBASIC13.51□□□□□ -0.25
PAX9P55771 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.51□□□□□ -0.25
PAX9P55771 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.51□□□□□ -0.25
PAX9P55771 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
PAX9P55771 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PAX9P55771 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.51□□□□□ -0.25
PAX9P55771 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PAX9P55771 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
PAX9P55771 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.51□□□□□ -0.25
PAX9P55771 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.51□□□□□ -0.25
PAX9P55771 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.51□□□□□ -0.25
PAX9P55771 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 LINC01023-201ENST00000606054 436 ntBASIC13.51□□□□□ -0.25
PAX9P55771 AL592071.1-201ENST00000611956 408 ntBASIC13.51□□□□□ -0.25
PAX9P55771 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.51□□□□□ -0.25
PAX9P55771 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.51□□□□□ -0.25
PAX9P55771 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.51□□□□□ -0.25
PAX9P55771 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PAX9P55771 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 AC073508.3-201ENST00000619697 1419 ntBASIC13.5□□□□□ -0.25
PAX9P55771 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.5□□□□□ -0.25
PAX9P55771 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
PAX9P55771 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 SPDYE13P-201ENST00000445314 798 ntBASIC13.5□□□□□ -0.25
PAX9P55771 AC112907.2-201ENST00000448639 330 ntBASIC13.5□□□□□ -0.25
PAX9P55771 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.5□□□□□ -0.25
PAX9P55771 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 AC112504.1-201ENST00000623415 1841 ntBASIC13.5□□□□□ -0.25
PAX9P55771 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
PAX9P55771 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.5□□□□□ -0.25
PAX9P55771 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
PAX9P55771 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
PAX9P55771 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.49□□□□□ -0.25
PAX9P55771 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
PAX9P55771 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
PAX9P55771 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.49□□□□□ -0.25
PAX9P55771 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
PAX9P55771 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms