Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.28■□□□□ 0.36
ITGA8P53708 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA8P53708 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ITGA8P53708 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA8P53708 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA8P53708 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ITGA8P53708 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA8P53708 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.28■□□□□ 0.36
ITGA8P53708 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA8P53708 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA8P53708 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
ITGA8P53708 AC011270.2-201ENST00000624293 2550 ntBASIC17.28■□□□□ 0.36
ITGA8P53708 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.28■□□□□ 0.36
ITGA8P53708 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ITGA8P53708 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA8P53708 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA8P53708 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA8P53708 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA8P53708 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ITGA8P53708 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.27■□□□□ 0.36
ITGA8P53708 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.27■□□□□ 0.36
ITGA8P53708 AL590787.1-201ENST00000568856 1315 ntBASIC17.27■□□□□ 0.36
ITGA8P53708 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ITGA8P53708 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.27■□□□□ 0.36
ITGA8P53708 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 LINC00265-3P-201ENST00000447588 903 ntBASIC17.27■□□□□ 0.36
ITGA8P53708 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.27■□□□□ 0.36
ITGA8P53708 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.27■□□□□ 0.36
ITGA8P53708 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.27■□□□□ 0.36
ITGA8P53708 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.27■□□□□ 0.36
ITGA8P53708 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ITGA8P53708 TERC-201ENST00000602385 541 ntBASIC17.27■□□□□ 0.36
ITGA8P53708 AC073592.4-201ENST00000623827 446 ntBASIC17.27■□□□□ 0.36
ITGA8P53708 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.27■□□□□ 0.36
ITGA8P53708 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ITGA8P53708 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ITGA8P53708 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ITGA8P53708 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ITGA8P53708 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ITGA8P53708 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ITGA8P53708 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ITGA8P53708 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.27■□□□□ 0.35
ITGA8P53708 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ITGA8P53708 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
ITGA8P53708 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.27■□□□□ 0.35
ITGA8P53708 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ITGA8P53708 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ITGA8P53708 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 GGT3P-204ENST00000453783 1664 ntBASIC17.26■□□□□ 0.35
ITGA8P53708 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 AL596257.1-201ENST00000641463 2694 ntBASIC17.26■□□□□ 0.35
ITGA8P53708 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.26■□□□□ 0.35
ITGA8P53708 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 AL596087.1-201ENST00000400979 1969 ntBASIC17.26■□□□□ 0.35
ITGA8P53708 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.26■□□□□ 0.35
ITGA8P53708 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 AC079776.2-201ENST00000641154 1609 ntBASIC17.26■□□□□ 0.35
ITGA8P53708 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ITGA8P53708 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.26■□□□□ 0.35
ITGA8P53708 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.26■□□□□ 0.35
ITGA8P53708 ABCD1P5-201ENST00000445663 754 ntBASIC17.26■□□□□ 0.35
ITGA8P53708 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.26■□□□□ 0.35
ITGA8P53708 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ITGA8P53708 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.26■□□□□ 0.35
ITGA8P53708 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.26■□□□□ 0.35
ITGA8P53708 AC074051.2-201ENST00000565115 352 ntBASIC17.26■□□□□ 0.35
ITGA8P53708 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 AC116407.4-201ENST00000623319 1061 ntBASIC17.26■□□□□ 0.35
ITGA8P53708 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.26■□□□□ 0.35
ITGA8P53708 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
ITGA8P53708 AL671710.1-201ENST00000610245 2349 ntBASIC17.26■□□□□ 0.35
ITGA8P53708 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.26■□□□□ 0.35
ITGA8P53708 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA8P53708 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms