Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.17■□□□□ 0.5
PDE6CP51160 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDE6CP51160 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.17■□□□□ 0.5
PDE6CP51160 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.17■□□□□ 0.5
PDE6CP51160 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PDE6CP51160 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.17■□□□□ 0.5
PDE6CP51160 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDE6CP51160 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.17■□□□□ 0.5
PDE6CP51160 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PDE6CP51160 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
PDE6CP51160 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDE6CP51160 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6CP51160 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDE6CP51160 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6CP51160 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6CP51160 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6CP51160 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDE6CP51160 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.16■□□□□ 0.5
PDE6CP51160 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6CP51160 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6CP51160 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.16■□□□□ 0.5
PDE6CP51160 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
PDE6CP51160 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PDE6CP51160 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PDE6CP51160 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.16■□□□□ 0.5
PDE6CP51160 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
PDE6CP51160 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.16■□□□□ 0.5
PDE6CP51160 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDE6CP51160 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.16■□□□□ 0.5
PDE6CP51160 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6CP51160 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
PDE6CP51160 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PDE6CP51160 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6CP51160 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDE6CP51160 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.16■□□□□ 0.5
PDE6CP51160 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PDE6CP51160 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PDE6CP51160 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE6CP51160 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 AL645728.1-201ENST00000366221 2101 ntBASIC18.15■□□□□ 0.5
PDE6CP51160 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 MIR1233-2-201ENST00000408138 82 ntBASIC18.15■□□□□ 0.5
PDE6CP51160 MIR1233-1-201ENST00000408722 82 ntBASIC18.15■□□□□ 0.5
PDE6CP51160 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 ELK2BP-201ENST00000415014 1224 ntBASIC18.15■□□□□ 0.5
PDE6CP51160 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.15■□□□□ 0.5
PDE6CP51160 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 PGAM5P1-201ENST00000518923 814 ntBASIC18.15■□□□□ 0.5
PDE6CP51160 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE6CP51160 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.15■□□□□ 0.5
PDE6CP51160 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PDE6CP51160 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
PDE6CP51160 KRT8P49-201ENST00000604166 1432 ntBASIC18.15■□□□□ 0.5
PDE6CP51160 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE6CP51160 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6CP51160 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDE6CP51160 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
PDE6CP51160 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDE6CP51160 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
PDE6CP51160 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms