Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.93■□□□□ 0.46
PSEN1P49768 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.93■□□□□ 0.46
PSEN1P49768 MIR940-201ENST00000401276 94 ntBASIC17.93■□□□□ 0.46
PSEN1P49768 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.93■□□□□ 0.46
PSEN1P49768 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC17.93■□□□□ 0.46
PSEN1P49768 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.93■□□□□ 0.46
PSEN1P49768 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
PSEN1P49768 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.93■□□□□ 0.46
PSEN1P49768 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.93■□□□□ 0.46
PSEN1P49768 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.93■□□□□ 0.46
PSEN1P49768 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.93■□□□□ 0.46
PSEN1P49768 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
PSEN1P49768 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.93■□□□□ 0.46
PSEN1P49768 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.93■□□□□ 0.46
PSEN1P49768 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.93■□□□□ 0.46
PSEN1P49768 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.93■□□□□ 0.46
PSEN1P49768 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PSEN1P49768 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PSEN1P49768 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 AC093525.9-201ENST00000624961 1746 ntBASIC17.92■□□□□ 0.46
PSEN1P49768 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 EGFEM1P-202ENST00000431685 1563 ntBASIC17.92■□□□□ 0.46
PSEN1P49768 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.92■□□□□ 0.46
PSEN1P49768 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PSEN1P49768 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PSEN1P49768 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PSEN1P49768 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PSEN1P49768 AC007967.2-201ENST00000432613 625 ntBASIC17.92■□□□□ 0.46
PSEN1P49768 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.92■□□□□ 0.46
PSEN1P49768 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.92■□□□□ 0.46
PSEN1P49768 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.92■□□□□ 0.46
PSEN1P49768 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.92■□□□□ 0.46
PSEN1P49768 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.92■□□□□ 0.46
PSEN1P49768 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.92■□□□□ 0.46
PSEN1P49768 AC040169.1-201ENST00000565382 521 ntBASIC17.92■□□□□ 0.46
PSEN1P49768 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PSEN1P49768 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.92■□□□□ 0.46
PSEN1P49768 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.92■□□□□ 0.46
PSEN1P49768 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 AC116353.5-201ENST00000638148 1699 ntBASIC17.92■□□□□ 0.46
PSEN1P49768 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.92■□□□□ 0.46
PSEN1P49768 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PSEN1P49768 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PSEN1P49768 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PSEN1P49768 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.91■□□□□ 0.46
PSEN1P49768 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
PSEN1P49768 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.91■□□□□ 0.46
PSEN1P49768 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PSEN1P49768 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 HCG4B-203ENST00000450128 991 ntBASIC17.91■□□□□ 0.46
PSEN1P49768 AC104629.1-201ENST00000494226 508 ntBASIC17.91■□□□□ 0.46
PSEN1P49768 PGAM5P1-201ENST00000518923 814 ntBASIC17.91■□□□□ 0.46
PSEN1P49768 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC17.91■□□□□ 0.46
PSEN1P49768 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC17.91■□□□□ 0.46
PSEN1P49768 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.91■□□□□ 0.46
PSEN1P49768 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
PSEN1P49768 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC17.91■□□□□ 0.46
PSEN1P49768 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.91■□□□□ 0.46
PSEN1P49768 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PSEN1P49768 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 AC108860.2-201ENST00000562760 2183 ntBASIC17.91■□□□□ 0.46
PSEN1P49768 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PSEN1P49768 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms