Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GDNFP39905 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GDNFP39905 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.69□□□□□ -0.06
GDNFP39905 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GDNFP39905 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.68□□□□□ -0.06
GDNFP39905 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.68□□□□□ -0.06
GDNFP39905 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.68□□□□□ -0.06
GDNFP39905 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
GDNFP39905 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.68□□□□□ -0.06
GDNFP39905 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.68□□□□□ -0.06
GDNFP39905 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.68□□□□□ -0.06
GDNFP39905 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GDNFP39905 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.68□□□□□ -0.06
GDNFP39905 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.68□□□□□ -0.06
GDNFP39905 AC116407.4-201ENST00000623319 1061 ntBASIC14.68□□□□□ -0.06
GDNFP39905 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GDNFP39905 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.68□□□□□ -0.06
GDNFP39905 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.68□□□□□ -0.06
GDNFP39905 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.68□□□□□ -0.06
GDNFP39905 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GDNFP39905 AL645728.1-201ENST00000366221 2101 ntBASIC14.68□□□□□ -0.06
GDNFP39905 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GDNFP39905 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GDNFP39905 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
GDNFP39905 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.67□□□□□ -0.06
GDNFP39905 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 NORAD-201ENST00000565493 5339 ntBASIC14.67□□□□□ -0.06
GDNFP39905 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.67□□□□□ -0.06
GDNFP39905 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
GDNFP39905 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
GDNFP39905 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.67□□□□□ -0.06
GDNFP39905 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 AL845331.1-201ENST00000424978 1190 ntBASIC14.67□□□□□ -0.06
GDNFP39905 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.67□□□□□ -0.06
GDNFP39905 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.67□□□□□ -0.06
GDNFP39905 RN7SL606P-201ENST00000472779 293 ntBASIC14.67□□□□□ -0.06
GDNFP39905 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.67□□□□□ -0.06
GDNFP39905 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.67□□□□□ -0.06
GDNFP39905 AL592071.1-201ENST00000611956 408 ntBASIC14.67□□□□□ -0.06
GDNFP39905 AC124864.1-201ENST00000623408 392 ntBASIC14.67□□□□□ -0.06
GDNFP39905 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
GDNFP39905 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
GDNFP39905 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.67□□□□□ -0.06
GDNFP39905 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GDNFP39905 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms