Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.34□□□□□ -0.11
CDKN1AP38936 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKN1AP38936 AL009183.1-201ENST00000603760 355 ntBASIC14.34□□□□□ -0.11
CDKN1AP38936 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.34□□□□□ -0.11
CDKN1AP38936 AL136317.3-201ENST00000618497 906 ntBASIC14.34□□□□□ -0.11
CDKN1AP38936 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKN1AP38936 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN1AP38936 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.34□□□□□ -0.11
CDKN1AP38936 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CDKN1AP38936 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKN1AP38936 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CDKN1AP38936 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN1AP38936 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN1AP38936 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN1AP38936 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN1AP38936 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.34□□□□□ -0.11
CDKN1AP38936 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CDKN1AP38936 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKN1AP38936 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CDKN1AP38936 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDKN1AP38936 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDKN1AP38936 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CDKN1AP38936 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.33□□□□□ -0.12
CDKN1AP38936 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.33□□□□□ -0.12
CDKN1AP38936 MIR4745-201ENST00000577608 62 ntBASIC14.33□□□□□ -0.12
CDKN1AP38936 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.33□□□□□ -0.12
CDKN1AP38936 AL390955.2-201ENST00000603032 514 ntBASIC14.33□□□□□ -0.12
CDKN1AP38936 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.33□□□□□ -0.12
CDKN1AP38936 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.33□□□□□ -0.12
CDKN1AP38936 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 AKAP8P1-201ENST00000434743 1349 ntBASIC14.33□□□□□ -0.12
CDKN1AP38936 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDKN1AP38936 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDKN1AP38936 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.33□□□□□ -0.12
CDKN1AP38936 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDKN1AP38936 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDKN1AP38936 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.32□□□□□ -0.12
CDKN1AP38936 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.32□□□□□ -0.12
CDKN1AP38936 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 AL353732.1-201ENST00000569618 1459 ntBASIC14.32□□□□□ -0.12
CDKN1AP38936 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 LINC00896-202ENST00000609602 2128 ntBASIC14.32□□□□□ -0.12
CDKN1AP38936 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CDKN1AP38936 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.32□□□□□ -0.12
CDKN1AP38936 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.32□□□□□ -0.12
CDKN1AP38936 AC069262.1-201ENST00000539058 672 ntBASIC14.32□□□□□ -0.12
CDKN1AP38936 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.32□□□□□ -0.12
CDKN1AP38936 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CDKN1AP38936 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDKN1AP38936 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CDKN1AP38936 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.32□□□□□ -0.12
CDKN1AP38936 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDKN1AP38936 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 CICP6-201ENST00000457191 2729 ntBASIC14.32□□□□□ -0.12
CDKN1AP38936 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
CDKN1AP38936 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKN1AP38936 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDKN1AP38936 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.32□□□□□ -0.12
CDKN1AP38936 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDKN1AP38936 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.31□□□□□ -0.12
CDKN1AP38936 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDKN1AP38936 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms