Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.73■□□□□ 0.43
PCK1P35558 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 AC008741.2-201ENST00000612792 3115 ntBASIC17.73■□□□□ 0.43
PCK1P35558 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PCK1P35558 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
PCK1P35558 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 PTCHD3P3-201ENST00000403073 906 ntBASIC17.73■□□□□ 0.43
PCK1P35558 KRT18P27-201ENST00000427733 1299 ntBASIC17.73■□□□□ 0.43
PCK1P35558 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.73■□□□□ 0.43
PCK1P35558 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.73■□□□□ 0.43
PCK1P35558 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PCK1P35558 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.73■□□□□ 0.43
PCK1P35558 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.73■□□□□ 0.43
PCK1P35558 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCK1P35558 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCK1P35558 LINC00895-201ENST00000629028 1637 ntBASIC17.72■□□□□ 0.43
PCK1P35558 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.72■□□□□ 0.43
PCK1P35558 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.72■□□□□ 0.43
PCK1P35558 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
PCK1P35558 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.72■□□□□ 0.43
PCK1P35558 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.72■□□□□ 0.43
PCK1P35558 AC006504.4-201ENST00000592118 1568 ntBASIC17.72■□□□□ 0.43
PCK1P35558 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.72■□□□□ 0.43
PCK1P35558 EMBP1-201ENST00000458200 901 ntBASIC17.72■□□□□ 0.43
PCK1P35558 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.72■□□□□ 0.43
PCK1P35558 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.72■□□□□ 0.43
PCK1P35558 AC073648.2-201ENST00000510116 352 ntBASIC17.72■□□□□ 0.43
PCK1P35558 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.72■□□□□ 0.43
PCK1P35558 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCK1P35558 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 AL121912.1-201ENST00000603683 238 ntBASIC17.72■□□□□ 0.43
PCK1P35558 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.72■□□□□ 0.43
PCK1P35558 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.72■□□□□ 0.43
PCK1P35558 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.72■□□□□ 0.43
PCK1P35558 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.72■□□□□ 0.43
PCK1P35558 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PCK1P35558 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCK1P35558 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCK1P35558 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.72■□□□□ 0.43
PCK1P35558 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.72■□□□□ 0.43
PCK1P35558 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
PCK1P35558 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.72■□□□□ 0.43
PCK1P35558 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.72■□□□□ 0.43
PCK1P35558 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
PCK1P35558 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCK1P35558 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.72■□□□□ 0.43
PCK1P35558 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCK1P35558 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.71■□□□□ 0.43
PCK1P35558 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PCK1P35558 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.71■□□□□ 0.43
PCK1P35558 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.71■□□□□ 0.43
PCK1P35558 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.71■□□□□ 0.43
PCK1P35558 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCK1P35558 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms