Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCN1P35523 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCN1P35523 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLCN1P35523 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.14■□□□□ 0.66
CLCN1P35523 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.14■□□□□ 0.65
CLCN1P35523 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC19.14■□□□□ 0.65
CLCN1P35523 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.14■□□□□ 0.65
CLCN1P35523 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 TSPY12P-201ENST00000421279 868 ntBASIC19.14■□□□□ 0.65
CLCN1P35523 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CLCN1P35523 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CLCN1P35523 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CLCN1P35523 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.14■□□□□ 0.65
CLCN1P35523 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.14■□□□□ 0.65
CLCN1P35523 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CLCN1P35523 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.14■□□□□ 0.65
CLCN1P35523 AC009949.1-201ENST00000623048 1830 ntBASIC19.14■□□□□ 0.65
CLCN1P35523 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLCN1P35523 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CLCN1P35523 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CLCN1P35523 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCN1P35523 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCN1P35523 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.13■□□□□ 0.65
CLCN1P35523 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
CLCN1P35523 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.13■□□□□ 0.65
CLCN1P35523 AL671277.2-201ENST00000458060 996 ntBASIC19.13■□□□□ 0.65
CLCN1P35523 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.13■□□□□ 0.65
CLCN1P35523 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCN1P35523 AL390719.2-201ENST00000606993 987 ntBASIC19.13■□□□□ 0.65
CLCN1P35523 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.13■□□□□ 0.65
CLCN1P35523 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CLCN1P35523 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCN1P35523 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLCN1P35523 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCN1P35523 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCN1P35523 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCN1P35523 CICP24-201ENST00000605464 2705 ntBASIC19.13■□□□□ 0.65
CLCN1P35523 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN1P35523 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CLCN1P35523 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCN1P35523 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLCN1P35523 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCN1P35523 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CLCN1P35523 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCN1P35523 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCN1P35523 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.12■□□□□ 0.65
CLCN1P35523 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCN1P35523 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 AC068472.1-201ENST00000474589 881 ntBASIC19.12■□□□□ 0.65
CLCN1P35523 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.12■□□□□ 0.65
CLCN1P35523 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CLCN1P35523 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN1P35523 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CLCN1P35523 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCN1P35523 AC139749.1-202ENST00000617529 3139 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms