Protein–RNA interactions for Protein: P33897

ABCD1, ATP-binding cassette sub-family D member 1, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P33897 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD1P33897 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD1P33897 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCD1P33897 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD1P33897 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCD1P33897 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.32■□□□□ 0.52
ABCD1P33897 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.32■□□□□ 0.52
ABCD1P33897 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.32■□□□□ 0.52
ABCD1P33897 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.32■□□□□ 0.52
ABCD1P33897 MIR3687-2-201ENST00000577708 61 ntBASIC18.32■□□□□ 0.52
ABCD1P33897 MIR3687-1-201ENST00000614492 61 ntBASIC18.32■□□□□ 0.52
ABCD1P33897 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.32■□□□□ 0.52
ABCD1P33897 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.32■□□□□ 0.52
ABCD1P33897 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD1P33897 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD1P33897 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ABCD1P33897 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD1P33897 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ABCD1P33897 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ABCD1P33897 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD1P33897 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD1P33897 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD1P33897 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.32■□□□□ 0.52
ABCD1P33897 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.32■□□□□ 0.52
ABCD1P33897 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ABCD1P33897 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ABCD1P33897 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ABCD1P33897 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.31■□□□□ 0.52
ABCD1P33897 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCD1P33897 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
ABCD1P33897 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 YBX2P1-201ENST00000394192 760 ntBASIC18.31■□□□□ 0.52
ABCD1P33897 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ABCD1P33897 BX842568.4-201ENST00000421222 227 ntBASIC18.31■□□□□ 0.52
ABCD1P33897 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ABCD1P33897 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.31■□□□□ 0.52
ABCD1P33897 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.31■□□□□ 0.52
ABCD1P33897 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.31■□□□□ 0.52
ABCD1P33897 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.31■□□□□ 0.52
ABCD1P33897 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ABCD1P33897 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.31■□□□□ 0.52
ABCD1P33897 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.31■□□□□ 0.52
ABCD1P33897 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.31■□□□□ 0.52
ABCD1P33897 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.31■□□□□ 0.52
ABCD1P33897 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ABCD1P33897 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ABCD1P33897 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ABCD1P33897 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.3■□□□□ 0.52
ABCD1P33897 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.3■□□□□ 0.52
ABCD1P33897 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ABCD1P33897 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.3■□□□□ 0.52
ABCD1P33897 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ABCD1P33897 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.3■□□□□ 0.52
ABCD1P33897 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
ABCD1P33897 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.3■□□□□ 0.52
ABCD1P33897 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
ABCD1P33897 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.3■□□□□ 0.52
ABCD1P33897 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ABCD1P33897 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ABCD1P33897 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD1P33897 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD1P33897 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD1P33897 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.29■□□□□ 0.52
ABCD1P33897 AKAP8P1-201ENST00000434743 1349 ntBASIC18.29■□□□□ 0.52
ABCD1P33897 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD1P33897 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ABCD1P33897 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ABCD1P33897 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms