Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LCN1P31025 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
LCN1P31025 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LCN1P31025 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LCN1P31025 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LCN1P31025 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
LCN1P31025 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LCN1P31025 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LCN1P31025 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LCN1P31025 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LCN1P31025 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
LCN1P31025 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.58■□□□□ 0.08
LCN1P31025 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCN1P31025 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCN1P31025 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCN1P31025 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LCN1P31025 MRPL3P1-201ENST00000400109 1033 ntBASIC15.58■□□□□ 0.08
LCN1P31025 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCN1P31025 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
LCN1P31025 HLA-J-202ENST00000469281 1241 ntBASIC15.58■□□□□ 0.08
LCN1P31025 SLC25A6P2-201ENST00000497974 877 ntBASIC15.58■□□□□ 0.08
LCN1P31025 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.58■□□□□ 0.08
LCN1P31025 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.58■□□□□ 0.08
LCN1P31025 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCN1P31025 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.58■□□□□ 0.08
LCN1P31025 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
LCN1P31025 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.58■□□□□ 0.08
LCN1P31025 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.58■□□□□ 0.08
LCN1P31025 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.58■□□□□ 0.08
LCN1P31025 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
LCN1P31025 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.58■□□□□ 0.08
LCN1P31025 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.58■□□□□ 0.08
LCN1P31025 AC117500.6-201ENST00000624871 588 ntBASIC15.58■□□□□ 0.08
LCN1P31025 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LCN1P31025 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCN1P31025 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.58■□□□□ 0.08
LCN1P31025 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.58■□□□□ 0.08
LCN1P31025 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.58■□□□□ 0.08
LCN1P31025 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
LCN1P31025 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCN1P31025 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.58■□□□□ 0.08
LCN1P31025 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LCN1P31025 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LCN1P31025 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.58■□□□□ 0.08
LCN1P31025 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LCN1P31025 AL353732.1-201ENST00000569618 1459 ntBASIC15.58■□□□□ 0.08
LCN1P31025 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.58■□□□□ 0.08
LCN1P31025 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.58■□□□□ 0.08
LCN1P31025 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LCN1P31025 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.57■□□□□ 0.08
LCN1P31025 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LCN1P31025 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.57■□□□□ 0.08
LCN1P31025 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LCN1P31025 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.57■□□□□ 0.08
LCN1P31025 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
LCN1P31025 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
LCN1P31025 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.57■□□□□ 0.08
LCN1P31025 HCG4-201ENST00000418983 998 ntBASIC15.57■□□□□ 0.08
LCN1P31025 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.57■□□□□ 0.08
LCN1P31025 AC108073.2-201ENST00000464002 357 ntBASIC15.57■□□□□ 0.08
LCN1P31025 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.57■□□□□ 0.08
LCN1P31025 MPDU1-223ENST00000582151 728 ntBASIC15.57■□□□□ 0.08
LCN1P31025 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.57■□□□□ 0.08
LCN1P31025 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.57■□□□□ 0.08
LCN1P31025 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.57■□□□□ 0.08
LCN1P31025 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
LCN1P31025 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LCN1P31025 HLA-A-201ENST00000376802 1334 ntBASIC15.57■□□□□ 0.08
LCN1P31025 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.57■□□□□ 0.08
LCN1P31025 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.57■□□□□ 0.08
LCN1P31025 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LCN1P31025 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LCN1P31025 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.57■□□□□ 0.08
LCN1P31025 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LCN1P31025 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LCN1P31025 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCN1P31025 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCN1P31025 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
LCN1P31025 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCN1P31025 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LCN1P31025 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.56■□□□□ 0.08
LCN1P31025 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCN1P31025 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.56■□□□□ 0.08
LCN1P31025 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
LCN1P31025 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LCN1P31025 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms