Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.22■□□□□ 0.19
LAMA1P25391 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LAMA1P25391 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.22■□□□□ 0.19
LAMA1P25391 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LAMA1P25391 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
LAMA1P25391 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LAMA1P25391 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.21■□□□□ 0.19
LAMA1P25391 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.21■□□□□ 0.19
LAMA1P25391 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LAMA1P25391 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
LAMA1P25391 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LAMA1P25391 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
LAMA1P25391 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.21■□□□□ 0.19
LAMA1P25391 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.21■□□□□ 0.19
LAMA1P25391 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LAMA1P25391 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LAMA1P25391 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LAMA1P25391 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LAMA1P25391 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LAMA1P25391 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LAMA1P25391 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.21■□□□□ 0.19
LAMA1P25391 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LAMA1P25391 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.21■□□□□ 0.19
LAMA1P25391 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LAMA1P25391 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LAMA1P25391 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LAMA1P25391 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.21■□□□□ 0.19
LAMA1P25391 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.21■□□□□ 0.19
LAMA1P25391 SLC25A1P3-201ENST00000395415 828 ntBASIC16.21■□□□□ 0.19
LAMA1P25391 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.21■□□□□ 0.19
LAMA1P25391 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LAMA1P25391 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.21■□□□□ 0.19
LAMA1P25391 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.21■□□□□ 0.18
LAMA1P25391 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LAMA1P25391 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LAMA1P25391 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
LAMA1P25391 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.2■□□□□ 0.18
LAMA1P25391 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.2■□□□□ 0.18
LAMA1P25391 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.2■□□□□ 0.18
LAMA1P25391 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.2■□□□□ 0.18
LAMA1P25391 AC084346.2-201ENST00000607097 949 ntBASIC16.2■□□□□ 0.18
LAMA1P25391 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.2■□□□□ 0.18
LAMA1P25391 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LAMA1P25391 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.2■□□□□ 0.18
LAMA1P25391 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.2■□□□□ 0.18
LAMA1P25391 BNIP3P42-201ENST00000454982 569 ntBASIC16.2■□□□□ 0.18
LAMA1P25391 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.2■□□□□ 0.18
LAMA1P25391 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.2■□□□□ 0.18
LAMA1P25391 CYP2A7P1-201ENST00000595391 815 ntBASIC16.2■□□□□ 0.18
LAMA1P25391 BNIP3P29-201ENST00000598302 571 ntBASIC16.2■□□□□ 0.18
LAMA1P25391 AC011447.5-201ENST00000616168 564 ntBASIC16.2■□□□□ 0.18
LAMA1P25391 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.2■□□□□ 0.18
LAMA1P25391 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LAMA1P25391 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.2■□□□□ 0.18
LAMA1P25391 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.2■□□□□ 0.18
LAMA1P25391 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.2■□□□□ 0.18
LAMA1P25391 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LAMA1P25391 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
LAMA1P25391 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 MYCLP2-201ENST00000449268 967 ntBASIC16.2■□□□□ 0.18
LAMA1P25391 AL079307.3-201ENST00000556114 283 ntBASIC16.2■□□□□ 0.18
LAMA1P25391 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 AL512343.1-201ENST00000605837 169 ntBASIC16.2■□□□□ 0.18
LAMA1P25391 AL139099.5-201ENST00000635274 300 ntBASIC16.2■□□□□ 0.18
LAMA1P25391 CETN4P-206ENST00000642099 2168 ntBASIC16.2■□□□□ 0.18
LAMA1P25391 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LAMA1P25391 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LAMA1P25391 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LAMA1P25391 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LAMA1P25391 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LAMA1P25391 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.19■□□□□ 0.18
LAMA1P25391 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LAMA1P25391 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
LAMA1P25391 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LAMA1P25391 HLA-H-201ENST00000383620 1096 ntBASIC16.19■□□□□ 0.18
LAMA1P25391 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.19■□□□□ 0.18
LAMA1P25391 AC007389.4-201ENST00000454674 793 ntBASIC16.19■□□□□ 0.18
LAMA1P25391 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.19■□□□□ 0.18
LAMA1P25391 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.19■□□□□ 0.18
LAMA1P25391 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.19■□□□□ 0.18
LAMA1P25391 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.19■□□□□ 0.18
LAMA1P25391 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LAMA1P25391 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LAMA1P25391 AC068880.1-201ENST00000507289 2297 ntBASIC16.19■□□□□ 0.18
LAMA1P25391 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LAMA1P25391 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms