Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AL033527.5-202ENST00000641632 1098 ntBASIC18.08■□□□□ 0.48
SYN1P17600 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.08■□□□□ 0.48
SYN1P17600 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.08■□□□□ 0.48
SYN1P17600 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYN1P17600 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SYN1P17600 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.08■□□□□ 0.48
SYN1P17600 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYN1P17600 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SYN1P17600 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SYN1P17600 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.07■□□□□ 0.48
SYN1P17600 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.07■□□□□ 0.48
SYN1P17600 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.07■□□□□ 0.48
SYN1P17600 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.07■□□□□ 0.48
SYN1P17600 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.07■□□□□ 0.48
SYN1P17600 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.07■□□□□ 0.48
SYN1P17600 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
SYN1P17600 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.07■□□□□ 0.48
SYN1P17600 MIR4492-201ENST00000581627 80 ntBASIC18.07■□□□□ 0.48
SYN1P17600 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 AC243960.2-201ENST00000600996 747 ntBASIC18.07■□□□□ 0.48
SYN1P17600 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.07■□□□□ 0.48
SYN1P17600 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 CLK3P2-201ENST00000427566 1453 ntBASIC18.07■□□□□ 0.48
SYN1P17600 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.07■□□□□ 0.48
SYN1P17600 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.07■□□□□ 0.48
SYN1P17600 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.07■□□□□ 0.48
SYN1P17600 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.07■□□□□ 0.48
SYN1P17600 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYN1P17600 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
SYN1P17600 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.06■□□□□ 0.48
SYN1P17600 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYN1P17600 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYN1P17600 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYN1P17600 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.06■□□□□ 0.48
SYN1P17600 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.06■□□□□ 0.48
SYN1P17600 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.06■□□□□ 0.48
SYN1P17600 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYN1P17600 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYN1P17600 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.06■□□□□ 0.48
SYN1P17600 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.06■□□□□ 0.48
SYN1P17600 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.06■□□□□ 0.48
SYN1P17600 SDHAP3-202ENST00000515467 728 ntBASIC18.06■□□□□ 0.48
SYN1P17600 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.06■□□□□ 0.48
SYN1P17600 AC090164.3-201ENST00000610780 2143 ntBASIC18.06■□□□□ 0.48
SYN1P17600 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SYN1P17600 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SYN1P17600 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.06■□□□□ 0.48
SYN1P17600 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SYN1P17600 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.06■□□□□ 0.48
SYN1P17600 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.06■□□□□ 0.48
SYN1P17600 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYN1P17600 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.06■□□□□ 0.48
SYN1P17600 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.06■□□□□ 0.48
SYN1P17600 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYN1P17600 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYN1P17600 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYN1P17600 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYN1P17600 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.06■□□□□ 0.48
SYN1P17600 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYN1P17600 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SYN1P17600 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYN1P17600 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYN1P17600 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYN1P17600 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYN1P17600 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYN1P17600 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYN1P17600 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SYN1P17600 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SYN1P17600 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYN1P17600 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
SYN1P17600 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYN1P17600 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.05■□□□□ 0.48
SYN1P17600 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.05■□□□□ 0.48
SYN1P17600 RN7SL190P-201ENST00000582519 257 ntBASIC18.05■□□□□ 0.48
SYN1P17600 AC233724.13-201ENST00000598383 410 ntBASIC18.05■□□□□ 0.48
SYN1P17600 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.05■□□□□ 0.48
SYN1P17600 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SYN1P17600 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYN1P17600 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.05■□□□□ 0.48
SYN1P17600 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms