Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 SCARNA2-201ENST00000458748 420 ntBASIC14□□□□□ -0.17
IGHV3-43DP0DP04 DUX4L17-201ENST00000557360 1267 ntBASIC14□□□□□ -0.17
IGHV3-43DP0DP04 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 AL589182.2-201ENST00000619332 1049 ntBASIC14□□□□□ -0.17
IGHV3-43DP0DP04 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 AC008741.2-201ENST00000612792 3115 ntBASIC14□□□□□ -0.17
IGHV3-43DP0DP04 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14□□□□□ -0.17
IGHV3-43DP0DP04 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 AP002490.2-201ENST00000524791 560 ntBASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 TERC-201ENST00000602385 541 ntBASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
IGHV3-43DP0DP04 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
IGHV3-43DP0DP04 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms