Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 HLA-A-202ENST00000376806 1854 ntBASIC18.22■□□□□ 0.51
CCDC172P0C7W6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 PKD1P5-201ENST00000532415 10291 ntBASIC18.22■□□□□ 0.51
CCDC172P0C7W6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCDC172P0C7W6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 NKAPP1-205ENST00000585790 367 ntBASIC18.21■□□□□ 0.51
CCDC172P0C7W6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CCDC172P0C7W6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
CCDC172P0C7W6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 MTDHP3-201ENST00000594186 672 ntBASIC18.2■□□□□ 0.5
CCDC172P0C7W6 AC013467.2-201ENST00000605472 835 ntBASIC18.2■□□□□ 0.5
CCDC172P0C7W6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 AL139011.1-202ENST00000642063 584 ntBASIC18.2■□□□□ 0.5
CCDC172P0C7W6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC172P0C7W6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.19■□□□□ 0.5
CCDC172P0C7W6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms