Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC100803.2-201ENST00000562459 1963 ntBASIC16.93■□□□□ 0.3
RETP07949 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RETP07949 AC022211.2-201ENST00000585075 2527 ntBASIC16.93■□□□□ 0.3
RETP07949 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.92■□□□□ 0.3
RETP07949 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.92■□□□□ 0.3
RETP07949 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.92■□□□□ 0.3
RETP07949 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RETP07949 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RETP07949 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RETP07949 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.92■□□□□ 0.3
RETP07949 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.92■□□□□ 0.3
RETP07949 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.92■□□□□ 0.3
RETP07949 MIR6080-201ENST00000617359 66 ntBASIC16.92■□□□□ 0.3
RETP07949 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.92■□□□□ 0.3
RETP07949 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.92■□□□□ 0.3
RETP07949 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RETP07949 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.92■□□□□ 0.3
RETP07949 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RETP07949 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RETP07949 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RETP07949 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RETP07949 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RETP07949 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RETP07949 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.91■□□□□ 0.3
RETP07949 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.91■□□□□ 0.3
RETP07949 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
RETP07949 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RETP07949 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RETP07949 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RETP07949 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RETP07949 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RETP07949 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RETP07949 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RETP07949 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
RETP07949 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RETP07949 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RETP07949 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.91■□□□□ 0.3
RETP07949 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.91■□□□□ 0.3
RETP07949 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.91■□□□□ 0.3
RETP07949 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.91■□□□□ 0.3
RETP07949 AC087163.2-201ENST00000457299 853 ntBASIC16.91■□□□□ 0.3
RETP07949 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RETP07949 AC004890.2-204ENST00000481968 304 ntBASIC16.91■□□□□ 0.3
RETP07949 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.91■□□□□ 0.3
RETP07949 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.91■□□□□ 0.3
RETP07949 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.91■□□□□ 0.3
RETP07949 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.91■□□□□ 0.3
RETP07949 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RETP07949 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.91■□□□□ 0.3
RETP07949 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.91■□□□□ 0.3
RETP07949 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
RETP07949 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RETP07949 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
RETP07949 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.9■□□□□ 0.3
RETP07949 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RETP07949 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.9■□□□□ 0.3
RETP07949 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.9■□□□□ 0.3
RETP07949 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.9■□□□□ 0.3
RETP07949 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RETP07949 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.9■□□□□ 0.3
RETP07949 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.9■□□□□ 0.3
RETP07949 AC092580.3-201ENST00000430932 139 ntBASIC16.9■□□□□ 0.3
RETP07949 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.9■□□□□ 0.3
RETP07949 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.9■□□□□ 0.3
RETP07949 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RETP07949 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.9■□□□□ 0.3
RETP07949 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.9■□□□□ 0.3
RETP07949 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RETP07949 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.9■□□□□ 0.3
RETP07949 MIR4515-201ENST00000584082 81 ntBASIC16.9■□□□□ 0.3
RETP07949 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms