Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.16□□□□□ -0.14
CD74P04233 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD74P04233 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.16□□□□□ -0.14
CD74P04233 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.15□□□□□ -0.14
CD74P04233 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CD74P04233 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CD74P04233 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CD74P04233 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.15□□□□□ -0.14
CD74P04233 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.15□□□□□ -0.14
CD74P04233 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CD74P04233 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CD74P04233 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.15□□□□□ -0.14
CD74P04233 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.15□□□□□ -0.14
CD74P04233 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.15□□□□□ -0.14
CD74P04233 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.15□□□□□ -0.14
CD74P04233 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.15□□□□□ -0.14
CD74P04233 AL359075.1-203ENST00000462729 1002 ntBASIC14.15□□□□□ -0.14
CD74P04233 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.15□□□□□ -0.14
CD74P04233 RNF126P1-202ENST00000569893 925 ntBASIC14.15□□□□□ -0.14
CD74P04233 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.15□□□□□ -0.14
CD74P04233 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CD74P04233 AC112504.1-201ENST00000623415 1841 ntBASIC14.15□□□□□ -0.14
CD74P04233 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.15□□□□□ -0.14
CD74P04233 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
CD74P04233 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD74P04233 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
CD74P04233 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CD74P04233 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
CD74P04233 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.14□□□□□ -0.15
CD74P04233 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.14□□□□□ -0.15
CD74P04233 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.14□□□□□ -0.15
CD74P04233 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.14□□□□□ -0.15
CD74P04233 LINC01568-207ENST00000641790 1380 ntBASIC14.14□□□□□ -0.15
CD74P04233 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CD74P04233 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.14□□□□□ -0.15
CD74P04233 HBZP1-201ENST00000354915 429 ntBASIC14.14□□□□□ -0.15
CD74P04233 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.14□□□□□ -0.15
CD74P04233 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.14□□□□□ -0.15
CD74P04233 SNORA78-201ENST00000459373 127 ntBASIC14.14□□□□□ -0.15
CD74P04233 COX11P1-201ENST00000489116 835 ntBASIC14.14□□□□□ -0.15
CD74P04233 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.14□□□□□ -0.15
CD74P04233 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.14□□□□□ -0.15
CD74P04233 GUSBP12-201ENST00000513727 720 ntBASIC14.14□□□□□ -0.15
CD74P04233 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.14□□□□□ -0.15
CD74P04233 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.14□□□□□ -0.15
CD74P04233 CDC14C-201ENST00000428251 1719 ntBASIC14.14□□□□□ -0.15
CD74P04233 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CD74P04233 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.14□□□□□ -0.15
CD74P04233 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.14□□□□□ -0.15
CD74P04233 AC097637.2-201ENST00000624096 1997 ntBASIC14.14□□□□□ -0.15
CD74P04233 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.14□□□□□ -0.15
CD74P04233 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CD74P04233 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.14□□□□□ -0.15
CD74P04233 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CD74P04233 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.14□□□□□ -0.15
CD74P04233 KRT18P22-201ENST00000402024 1347 ntBASIC14.14□□□□□ -0.15
CD74P04233 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CD74P04233 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms