Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.6□□□□□ -0.07
DHFRP00374 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.6□□□□□ -0.07
DHFRP00374 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
DHFRP00374 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.6□□□□□ -0.07
DHFRP00374 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
DHFRP00374 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.6□□□□□ -0.07
DHFRP00374 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.6□□□□□ -0.07
DHFRP00374 AC010653.2-201ENST00000623505 997 ntBASIC14.6□□□□□ -0.07
DHFRP00374 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.6□□□□□ -0.07
DHFRP00374 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.6□□□□□ -0.07
DHFRP00374 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
DHFRP00374 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
DHFRP00374 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.6□□□□□ -0.07
DHFRP00374 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
DHFRP00374 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
DHFRP00374 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.6□□□□□ -0.07
DHFRP00374 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.6□□□□□ -0.07
DHFRP00374 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.6□□□□□ -0.07
DHFRP00374 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.6□□□□□ -0.07
DHFRP00374 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
DHFRP00374 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
DHFRP00374 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
DHFRP00374 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
DHFRP00374 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
DHFRP00374 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
DHFRP00374 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.59□□□□□ -0.07
DHFRP00374 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.59□□□□□ -0.07
DHFRP00374 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.59□□□□□ -0.07
DHFRP00374 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.59□□□□□ -0.07
DHFRP00374 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.59□□□□□ -0.07
DHFRP00374 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.59□□□□□ -0.07
DHFRP00374 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
DHFRP00374 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
DHFRP00374 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.59□□□□□ -0.07
DHFRP00374 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
DHFRP00374 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
DHFRP00374 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 KRT8P47-201ENST00000604727 1398 ntBASIC14.59□□□□□ -0.07
DHFRP00374 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
DHFRP00374 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.59□□□□□ -0.07
DHFRP00374 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
DHFRP00374 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
DHFRP00374 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.58□□□□□ -0.07
DHFRP00374 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
DHFRP00374 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
DHFRP00374 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
DHFRP00374 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.58□□□□□ -0.07
DHFRP00374 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.58□□□□□ -0.07
DHFRP00374 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
DHFRP00374 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.58□□□□□ -0.07
DHFRP00374 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DHFRP00374 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DHFRP00374 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
DHFRP00374 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
DHFRP00374 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
DHFRP00374 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.58□□□□□ -0.08
DHFRP00374 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
DHFRP00374 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
DHFRP00374 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
DHFRP00374 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
DHFRP00374 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
DHFRP00374 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.58□□□□□ -0.08
DHFRP00374 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms